If you were looking for jalapeños the last time you went to Chipotle, they possibly weren't there, and for good reason. The fast-casual restaurant has pulled jalapeños from its stores here after they were possibly linked to a Salmonella outbreak that sickened more than 100 Minnesotans. Jalapeños are in several menu items at the restaurant chain, including chili-corn salsa, pico de gallo and guacamole." Cook: Using a food thermometer is the only way to ensure the safety of meat, poultry, seafood, and egg products for all cooking methods. Chill: Refrigerate or freeze meat, poultry, eggs, seafood, and other perishables within 2 hours of cooking or purchasing.